STRINGSTRING
AGI22364.1 AGI22364.1 AGI25386.1 AGI25386.1 AGI24580.1 AGI24580.1 AGI24581.1 AGI24581.1 AGI25151.1 AGI25151.1 AGI24948.1 AGI24948.1 AGI23540.1 AGI23540.1 AGI26312.1 AGI26312.1 AGI22753.1 AGI22753.1 AGI26862.1 AGI26862.1 AGI22722.1 AGI22722.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AGI22364.1Hypothetical protein; COG2202 FOG: PAS/PAC domain. (1244 aa)    
Predicted Functional Partners:
AGI25386.1
Putative two-component sensor; COG0591 Na+/proline symporter.
  
 
 0.931
AGI24580.1
Putative two-component system sensor kinase; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.879
AGI24581.1
Putative two-component system sensor kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
0.876
AGI25151.1
Putative two-component system sensor kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
0.876
AGI24948.1
Virulence sensor protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 
 0.861
AGI23540.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
 
 
0.860
AGI26312.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain.
 
 
0.852
AGI22753.1
Motility regulator; COG2199 FOG: GGDEF domain.
 
 
0.850
AGI26862.1
Two-component sensor; COG0642 Signal transduction histidine kinase.
 
 0.832
AGI22722.1
Multi-sensor hybrid histidine kinase; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
0.825
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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