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apaH apaH AGI26151.1 AGI26151.1 apaG apaG ksgA ksgA AGI23901.1 AGI23901.1 AGI25502.1 AGI25502.1 AGI22991.1 AGI22991.1 pdxA pdxA glpE glpE secE secE AGI22141.1 AGI22141.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
apaHDiadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. (274 aa)    
Predicted Functional Partners:
AGI26151.1
Putative signal transduction protein with EFhand domain; COG5126 Ca2+-binding protein (EF-Hand superfamily).
    
 0.975
apaG
CO2+/MG2+ efflux protein ApaG; COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport.
  
  
 0.947
ksgA
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.894
AGI23901.1
Ankyrin repeat-containing protein; COG0666 FOG: Ankyrin repeat.
   
 0.885
AGI25502.1
Ankyrin domain-containing protein; COG0666 FOG: Ankyrin repeat.
   
 0.885
AGI22991.1
ClpXP protease specificity-enhancing factor; COG2969 Stringent starvation protein B.
  
     0.730
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
  
  
 0.722
glpE
Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
  
    0.690
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
     0.690
AGI22141.1
Putative isomerase; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
  
 0.680
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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