STRINGSTRING
AGI22410.1 AGI22410.1 AGI25928.1 AGI25928.1 AGI25927.1 AGI25927.1 AGI25925.1 AGI25925.1 AGI25926.1 AGI25926.1 AGI22409.1 AGI22409.1 AGI22836.1 AGI22836.1 AGI21994.1 AGI21994.1 AGI23974.1 AGI23974.1 AGI26457.1 AGI26457.1 AGI22411.1 AGI22411.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22410.1COG3152 Predicted membrane protein. (370 aa)    
Predicted Functional Partners:
AGI25928.1
Hypothetical protein.
 
     0.753
AGI25927.1
Hypothetical protein.
 
     0.724
AGI25925.1
COG1714 Predicted membrane protein/domain.
 
    0.720
AGI25926.1
COG1300 Uncharacterized membrane protein.
 
    0.671
AGI22409.1
COG0300 Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.614
AGI22836.1
Hypothetical protein.
  
     0.611
AGI21994.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
     0.604
AGI23974.1
Type IV pilus assembly PilZ.
  
     0.594
AGI26457.1
COG5373 Predicted membrane protein.
  
     0.590
AGI22411.1
COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
  
    0.579
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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