Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22410.1 | AGI22411.1 | H681_02640 | H681_02645 | COG3152 Predicted membrane protein. | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | 0.579 |
AGI22410.1 | AGI22412.1 | H681_02640 | H681_02650 | COG3152 Predicted membrane protein. | COG1981 Predicted membrane protein. | 0.551 |
AGI22411.1 | AGI22410.1 | H681_02645 | H681_02640 | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | COG3152 Predicted membrane protein. | 0.579 |
AGI22411.1 | AGI22412.1 | H681_02645 | H681_02650 | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | COG1981 Predicted membrane protein. | 0.759 |
AGI22411.1 | AGI22413.1 | H681_02645 | H681_02655 | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | COG0038 Chloride channel protein EriC. | 0.443 |
AGI22411.1 | argC | H681_02645 | H681_02660 | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.411 |
AGI22412.1 | AGI22410.1 | H681_02650 | H681_02640 | COG1981 Predicted membrane protein. | COG3152 Predicted membrane protein. | 0.551 |
AGI22412.1 | AGI22411.1 | H681_02650 | H681_02645 | COG1981 Predicted membrane protein. | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | 0.759 |
AGI22412.1 | AGI22413.1 | H681_02650 | H681_02655 | COG1981 Predicted membrane protein. | COG0038 Chloride channel protein EriC. | 0.567 |
AGI22412.1 | AGI22492.1 | H681_02650 | H681_03050 | COG1981 Predicted membrane protein. | COG1239 Mg-chelatase subunit ChlI. | 0.905 |
AGI22412.1 | AGI23271.1 | H681_02650 | H681_06975 | COG1981 Predicted membrane protein. | COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.927 |
AGI22412.1 | AGI24907.1 | H681_02650 | H681_15195 | COG1981 Predicted membrane protein. | COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.925 |
AGI22412.1 | argC | H681_02650 | H681_02660 | COG1981 Predicted membrane protein. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.416 |
AGI22412.1 | hemE | H681_02650 | H681_22585 | COG1981 Predicted membrane protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.465 |
AGI22412.1 | hemF | H681_02650 | H681_00330 | COG1981 Predicted membrane protein. | Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX. | 0.949 |
AGI22412.1 | hemH | H681_02650 | H681_20570 | COG1981 Predicted membrane protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.954 |
AGI22413.1 | AGI22411.1 | H681_02655 | H681_02645 | COG0038 Chloride channel protein EriC. | COG2070 Dioxygenases related to 2-nitropropane dioxygenase. | 0.443 |
AGI22413.1 | AGI22412.1 | H681_02655 | H681_02650 | COG0038 Chloride channel protein EriC. | COG1981 Predicted membrane protein. | 0.567 |
AGI22413.1 | argC | H681_02655 | H681_02660 | COG0038 Chloride channel protein EriC. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.578 |
AGI22492.1 | AGI22412.1 | H681_03050 | H681_02650 | COG1239 Mg-chelatase subunit ChlI. | COG1981 Predicted membrane protein. | 0.905 |
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