STRINGSTRING
AGI22572.1 AGI22572.1 AGI22574.1 AGI22574.1 AGI22573.1 AGI22573.1 AGI24344.1 AGI24344.1 AGI22575.1 AGI22575.1 AGI22576.1 AGI22576.1 AGI22582.1 AGI22582.1 AGI24343.1 AGI24343.1 AGI24492.1 AGI24492.1 AGI25811.1 AGI25811.1 AGI22340.1 AGI22340.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22572.1COG1414 Transcriptional regulator. (271 aa)    
Predicted Functional Partners:
AGI22574.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
  
 0.858
AGI22573.1
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.765
AGI24344.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase.
 
  
 0.716
AGI22575.1
COG1042 Acyl-CoA synthetase (NDP forming).
 
    0.613
AGI22576.1
Hypothetical protein; COG2030 Acyl dehydratase.
 
    0.610
AGI22582.1
Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  
 0.608
AGI24343.1
Hypothetical protein; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.540
AGI24492.1
COG1414 Transcriptional regulator.
  
     0.524
AGI25811.1
Thiolase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.510
AGI22340.1
Hypothetical protein; COG2049 Allophanate hydrolase subunit 1.
  
    0.488
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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