STRINGSTRING
AGI22577.1 AGI22577.1 AGI22578.1 AGI22578.1 AGI22579.1 AGI22579.1 AGI22580.1 AGI22580.1 AGI22581.1 AGI22581.1 AGI22576.1 AGI22576.1 AGI22582.1 AGI22582.1 AGI22583.1 AGI22583.1 AGI22481.1 AGI22481.1 AGI22584.1 AGI22584.1 AGI23673.1 AGI23673.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22577.1Cis,cis-muconate transporter MucK; COG0477 Permeases of the major facilitator superfamily. (456 aa)    
Predicted Functional Partners:
AGI22578.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
       0.773
AGI22579.1
COG1960 Acyl-CoA dehydrogenases.
       0.773
AGI22580.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
       0.773
AGI22581.1
COG1960 Acyl-CoA dehydrogenases.
       0.732
AGI22576.1
Hypothetical protein; COG2030 Acyl dehydratase.
       0.642
AGI22582.1
Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.586
AGI22583.1
COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.544
AGI22481.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.504
AGI22584.1
Putative porin.
 
     0.495
AGI23673.1
COG0477 Permeases of the major facilitator superfamily.
  
  
 0.468
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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