STRINGSTRING
AGI22579.1 AGI22579.1 AGI22581.1 AGI22581.1 AGI22580.1 AGI22580.1 AGI22576.1 AGI22576.1 AGI22582.1 AGI22582.1 AGI22578.1 AGI22578.1 AGI21975.1 AGI21975.1 AGI24345.1 AGI24345.1 AGI26788.1 AGI26788.1 AGI24326.1 AGI24326.1 AGI24337.1 AGI24337.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22579.1COG1960 Acyl-CoA dehydrogenases. (352 aa)    
Predicted Functional Partners:
AGI22581.1
COG1960 Acyl-CoA dehydrogenases.
    0.953
AGI22580.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.951
AGI22576.1
Hypothetical protein; COG2030 Acyl dehydratase.
 
 0.925
AGI22582.1
Putative short-chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
  0.911
AGI22578.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
    0.810
AGI21975.1
COG1960 Acyl-CoA dehydrogenases.
 
    0.801
AGI24345.1
COG1960 Acyl-CoA dehydrogenases.
 
    0.797
AGI26788.1
COG1960 Acyl-CoA dehydrogenases.
 
    0.795
AGI24326.1
COG1960 Acyl-CoA dehydrogenases.
 
    0.792
AGI24337.1
COG1960 Acyl-CoA dehydrogenases.
 
    0.779
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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