STRINGSTRING
AGI22599.1 AGI22599.1 AGI22597.1 AGI22597.1 AGI22598.1 AGI22598.1 AGI26025.1 AGI26025.1 AGI26605.1 AGI26605.1 AGI22747.1 AGI22747.1 AGI26361.1 AGI26361.1 AGI26621.1 AGI26621.1 AGI23754.1 AGI23754.1 AGI26327.1 AGI26327.1 AGI26249.1 AGI26249.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22599.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (138 aa)    
Predicted Functional Partners:
AGI22597.1
Cation efflux family protein; COG0053 Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.834
AGI22598.1
COG2318 Uncharacterized protein conserved in bacteria.
       0.800
AGI26025.1
Hypothetical protein.
  
     0.749
AGI26605.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.725
AGI22747.1
Hypothetical protein.
  
     0.699
AGI26361.1
COG0515 Serine/threonine protein kinase.
  
     0.683
AGI26621.1
Anaerobically-induced outer membrane porin OprE precursor.
  
     0.673
AGI23754.1
Outer membrane porin OprE.
  
     0.672
AGI26327.1
Lipoprotein.
  
     0.653
AGI26249.1
Vanillate porin OpdK.
  
     0.649
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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