STRINGSTRING
AGI22606.1 AGI22606.1 AGI26307.1 AGI26307.1 AGI23176.1 AGI23176.1 AGI25099.1 AGI25099.1 AGI22389.1 AGI22389.1 AGI23623.1 AGI23623.1 AGI25116.1 AGI25116.1 AGI26387.1 AGI26387.1 AGI26031.1 AGI26031.1 AGI23698.1 AGI23698.1 AGI26030.1 AGI26030.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22606.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
AGI26307.1
HDOD domain-contain protein.
  
     0.738
AGI23176.1
Transferase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.732
AGI25099.1
Type IV pilus assembly PilZ.
 
     0.731
AGI22389.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.726
AGI23623.1
Hypothetical protein; COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
     0.704
AGI25116.1
Hypothetical protein.
  
     0.699
AGI26387.1
Hypothetical protein; COG3267 Type II secretory pathway, component ExeA (predicted ATPase).
  
     0.694
AGI26031.1
Hypothetical protein.
  
     0.682
AGI23698.1
Hypothetical protein.
  
     0.678
AGI26030.1
Hypothetical protein.
  
     0.675
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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