STRINGSTRING
AGI22607.1 AGI22607.1 AGI22674.1 AGI22674.1 AGI22608.1 AGI22608.1 AGI22606.1 AGI22606.1 AGI22609.1 AGI22609.1 AGI25219.1 AGI25219.1 AGI23495.1 AGI23495.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22607.1COG3416 Uncharacterized protein conserved in bacteria. (237 aa)    
Predicted Functional Partners:
AGI22674.1
Putative glucose-sensitive porin; COG3659 Carbohydrate-selective porin.
  
     0.672
AGI22608.1
Hypothetical protein.
       0.588
AGI22606.1
Hypothetical protein.
       0.544
AGI22609.1
COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
       0.483
AGI25219.1
COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
  
    0.436
AGI23495.1
Mechanosensitive ion channel family protein; COG3264 Small-conductance mechanosensitive channel.
  
     0.412
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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