STRINGSTRING
AGI22615.1 AGI22615.1 AGI22616.1 AGI22616.1 AGI22618.1 AGI22618.1 AGI22617.1 AGI22617.1 AGI22614.1 AGI22614.1 AGI24480.1 AGI24480.1 AGI22613.1 AGI22613.1 rnc rnc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI22615.1N-acetyltransferase YnaD; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (183 aa)    
Predicted Functional Partners:
AGI22616.1
Hypothetical protein; COG0778 Nitroreductase.
     
 0.801
AGI22618.1
HAD-superfamily hydrolase; COG0546 Predicted phosphatases.
     
 0.777
AGI22617.1
COG1946 Acyl-CoA thioesterase.
     
 0.769
AGI22614.1
MFS permease; COG2814 Arabinose efflux permease.
       0.486
AGI24480.1
L-ornithine N5-oxygenase; COG3486 Lysine/ornithine N-monooxygenase.
  
  
 0.460
AGI22613.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
     
 0.436
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.416
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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