Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22621.1 | AGI22624.1 | H681_03695 | H681_03710 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | COG3938 Proline racemase; Belongs to the proline racemase family. | 0.519 |
AGI22621.1 | AGI22628.1 | H681_03695 | H681_03730 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | Hypothetical protein. | 0.795 |
AGI22621.1 | AGI22636.1 | H681_03695 | H681_03770 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | COG3938 Proline racemase; Belongs to the proline racemase family. | 0.472 |
AGI22621.1 | AGI24568.1 | H681_03695 | H681_13490 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | Hypothetical protein; COG0385 Predicted Na+-dependent transporter. | 0.781 |
AGI22621.1 | AGI25720.1 | H681_03695 | H681_19265 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.673 |
AGI22621.1 | AGI25940.1 | H681_03695 | H681_20365 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.537 |
AGI22621.1 | AGI26111.1 | H681_03695 | H681_21220 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | Pyruvate carboxylase, propionyl-CoA carboxylase; COG0439 Biotin carboxylase. | 0.412 |
AGI22621.1 | AGI26770.1 | H681_03695 | H681_24515 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | Dipeptidase; COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | 0.673 |
AGI22621.1 | dxs | H681_03695 | H681_03690 | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.447 |
AGI22624.1 | AGI22621.1 | H681_03710 | H681_03695 | COG3938 Proline racemase; Belongs to the proline racemase family. | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.519 |
AGI22624.1 | AGI22628.1 | H681_03710 | H681_03730 | COG3938 Proline racemase; Belongs to the proline racemase family. | Hypothetical protein. | 0.983 |
AGI22628.1 | AGI22621.1 | H681_03730 | H681_03695 | Hypothetical protein. | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.795 |
AGI22628.1 | AGI22624.1 | H681_03730 | H681_03710 | Hypothetical protein. | COG3938 Proline racemase; Belongs to the proline racemase family. | 0.983 |
AGI22628.1 | AGI22636.1 | H681_03730 | H681_03770 | Hypothetical protein. | COG3938 Proline racemase; Belongs to the proline racemase family. | 0.617 |
AGI22636.1 | AGI22621.1 | H681_03770 | H681_03695 | COG3938 Proline racemase; Belongs to the proline racemase family. | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.472 |
AGI22636.1 | AGI22628.1 | H681_03770 | H681_03730 | COG3938 Proline racemase; Belongs to the proline racemase family. | Hypothetical protein. | 0.617 |
AGI24568.1 | AGI22621.1 | H681_13490 | H681_03695 | Hypothetical protein; COG0385 Predicted Na+-dependent transporter. | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.781 |
AGI25720.1 | AGI22621.1 | H681_19265 | H681_03695 | COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.673 |
AGI25940.1 | AGI22621.1 | H681_20365 | H681_03695 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Putative L-malate dehydrogenase; COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.537 |
AGI25940.1 | AGI26111.1 | H681_20365 | H681_21220 | Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Pyruvate carboxylase, propionyl-CoA carboxylase; COG0439 Biotin carboxylase. | 0.825 |
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