STRINGSTRING
AGI22623.1 AGI22623.1 AGI22635.1 AGI22635.1 AGI22633.1 AGI22633.1 AGI22634.1 AGI22634.1 AGI22624.1 AGI22624.1 dapB dapB AGI22622.1 AGI22622.1 AGI22636.1 AGI22636.1 AGI22678.1 AGI22678.1 AGI25206.1 AGI25206.1 asd asd
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22623.1COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family. (305 aa)    
Predicted Functional Partners:
AGI22635.1
FAD-dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
 
 
 0.954
AGI22633.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
  
  0.940
AGI22634.1
Ferredoxin; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
  
  0.931
AGI22624.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
  
 0.847
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.829
AGI22622.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
  
 0.808
AGI22636.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
  
 0.751
AGI22678.1
Amidohydrolase 2; COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold.
 
  
 0.722
AGI25206.1
COG0136 Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.717
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.678
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.