STRINGSTRING
AGI22635.1 AGI22635.1 AGI22633.1 AGI22633.1 AGI22634.1 AGI22634.1 AGI22636.1 AGI22636.1 AGI22623.1 AGI22623.1 AGI26782.1 AGI26782.1 AGI22624.1 AGI22624.1 AGI22637.1 AGI22637.1 AGI26282.1 AGI26282.1 dadX dadX AGI26781.1 AGI26781.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22635.1FAD-dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating). (370 aa)    
Predicted Functional Partners:
AGI22633.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
 0.997
AGI22634.1
Ferredoxin; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
  
 0.993
AGI22636.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
 
 0.993
AGI22623.1
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
 
 0.954
AGI26782.1
Sarcosine oxidase subunit alpha; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 
 0.827
AGI22624.1
COG3938 Proline racemase; Belongs to the proline racemase family.
 
  
 0.556
AGI22637.1
COG1802 Transcriptional regulators.
  
    0.524
AGI26282.1
Biosynthetic alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.505
dadX
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.505
AGI26781.1
COG4311 Sarcosine oxidase delta subunit.
  
 
 0.429
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.