STRINGSTRING
AGI22648.1 AGI22648.1 AGI22650.1 AGI22650.1 AGI22665.1 AGI22665.1 AGI24845.1 AGI24845.1 AGI22649.1 AGI22649.1 AGI22647.1 AGI22647.1 AGI22656.1 AGI22656.1 AGI22644.1 AGI22644.1 AGI22666.1 AGI22666.1 AGI22651.1 AGI22651.1 AGI24844.1 AGI24844.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22648.1Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. (289 aa)    
Predicted Functional Partners:
AGI22650.1
COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.993
AGI22665.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.992
AGI24845.1
COG3517 Uncharacterized protein conserved in bacteria.
 
  
 0.992
AGI22649.1
COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.989
AGI22647.1
Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria.
 
 
 0.982
AGI22656.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.981
AGI22644.1
Rhs element Vgr protein; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.973
AGI22666.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.973
AGI22651.1
COG3456 Uncharacterized conserved protein, contains FHA domain.
 
  
 0.971
AGI24844.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.970
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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