STRINGSTRING
AGI22651.1 AGI22651.1 AGI22648.1 AGI22648.1 AGI22649.1 AGI22649.1 AGI22650.1 AGI22650.1 AGI22647.1 AGI22647.1 AGI22646.1 AGI22646.1 AGI22644.1 AGI22644.1 AGI22655.1 AGI22655.1 AGI22645.1 AGI22645.1 AGI22656.1 AGI22656.1 AGI22666.1 AGI22666.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22651.1COG3456 Uncharacterized conserved protein, contains FHA domain. (398 aa)    
Predicted Functional Partners:
AGI22648.1
Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria.
 
  
 0.971
AGI22649.1
COG3522 Uncharacterized protein conserved in bacteria.
 
  
 0.966
AGI22650.1
COG3521 Uncharacterized protein conserved in bacteria.
 
  
 0.966
AGI22647.1
Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria.
 
  
 0.956
AGI22646.1
COG0631 Serine/threonine protein phosphatase.
 
  
 0.931
AGI22644.1
Rhs element Vgr protein; COG3501 Uncharacterized protein conserved in bacteria.
 
  
 0.929
AGI22655.1
COG3520 Uncharacterized protein conserved in bacteria.
 
  
 0.924
AGI22645.1
Serine-threonine kinase Stk1; COG0515 Serine/threonine protein kinase.
 
  
 0.922
AGI22656.1
COG3519 Uncharacterized protein conserved in bacteria.
 
  
 0.914
AGI22666.1
COG3516 Uncharacterized protein conserved in bacteria.
 
  
 0.875
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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