Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22647.1 | AGI22648.1 | H681_03825 | H681_03830 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | 0.982 |
AGI22647.1 | AGI22651.1 | H681_03825 | H681_03845 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | COG3456 Uncharacterized conserved protein, contains FHA domain. | 0.956 |
AGI22647.1 | AGI22656.1 | H681_03825 | H681_03870 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | COG3519 Uncharacterized protein conserved in bacteria. | 0.911 |
AGI22647.1 | AGI22663.1 | H681_03825 | H681_03905 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.771 |
AGI22647.1 | AGI22664.1 | H681_03825 | H681_03910 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | GPW/gp25 family protein; COG3518 Uncharacterized protein conserved in bacteria. | 0.822 |
AGI22647.1 | AGI22665.1 | H681_03825 | H681_03915 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | COG3517 Uncharacterized protein conserved in bacteria. | 0.881 |
AGI22647.1 | AGI22666.1 | H681_03825 | H681_03920 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | COG3516 Uncharacterized protein conserved in bacteria. | 0.864 |
AGI22647.1 | AGI22667.1 | H681_03825 | H681_03925 | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | COG3515 Uncharacterized protein conserved in bacteria. | 0.834 |
AGI22648.1 | AGI22647.1 | H681_03830 | H681_03825 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | 0.982 |
AGI22648.1 | AGI22651.1 | H681_03830 | H681_03845 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | COG3456 Uncharacterized conserved protein, contains FHA domain. | 0.971 |
AGI22648.1 | AGI22656.1 | H681_03830 | H681_03870 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | COG3519 Uncharacterized protein conserved in bacteria. | 0.981 |
AGI22648.1 | AGI22663.1 | H681_03830 | H681_03905 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.794 |
AGI22648.1 | AGI22664.1 | H681_03830 | H681_03910 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | GPW/gp25 family protein; COG3518 Uncharacterized protein conserved in bacteria. | 0.910 |
AGI22648.1 | AGI22665.1 | H681_03830 | H681_03915 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | COG3517 Uncharacterized protein conserved in bacteria. | 0.992 |
AGI22648.1 | AGI22666.1 | H681_03830 | H681_03920 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | COG3516 Uncharacterized protein conserved in bacteria. | 0.973 |
AGI22648.1 | AGI22667.1 | H681_03830 | H681_03925 | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | COG3515 Uncharacterized protein conserved in bacteria. | 0.892 |
AGI22651.1 | AGI22647.1 | H681_03845 | H681_03825 | COG3456 Uncharacterized conserved protein, contains FHA domain. | Type VI secretion protein IcmF; COG3523 Uncharacterized protein conserved in bacteria. | 0.956 |
AGI22651.1 | AGI22648.1 | H681_03845 | H681_03830 | COG3456 Uncharacterized conserved protein, contains FHA domain. | Putative outer membrane protein; COG3455 Uncharacterized protein conserved in bacteria. | 0.971 |
AGI22651.1 | AGI22656.1 | H681_03845 | H681_03870 | COG3456 Uncharacterized conserved protein, contains FHA domain. | COG3519 Uncharacterized protein conserved in bacteria. | 0.914 |
AGI22651.1 | AGI22663.1 | H681_03845 | H681_03905 | COG3456 Uncharacterized conserved protein, contains FHA domain. | Hypothetical protein. | 0.781 |
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