STRINGSTRING
AGI22700.1 AGI22700.1 AGI22701.1 AGI22701.1 AGI25853.1 AGI25853.1 AGI22702.1 AGI22702.1 AGI22699.1 AGI22699.1 AGI22698.1 AGI22698.1 AGI22697.1 AGI22697.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22700.1Hypothetical protein; COG1380 Putative effector of murein hydrolase LrgA. (120 aa)    
Predicted Functional Partners:
AGI22701.1
Hypothetical protein; COG1346 Putative effector of murein hydrolase.
 
  
 0.978
AGI25853.1
COG1346 Putative effector of murein hydrolase.
 
  
 0.861
AGI22702.1
COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease.
       0.751
AGI22699.1
Hypothetical protein; COG2030 Acyl dehydratase.
       0.556
AGI22698.1
COG4642 Uncharacterized protein conserved in bacteria.
     
 0.470
AGI22697.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
       0.400
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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