Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI21959.1 | AGI22711.1 | H681_00385 | H681_04145 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.465 |
AGI21959.1 | AGI22737.1 | H681_00385 | H681_04275 | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.426 |
AGI22710.1 | AGI22711.1 | H681_04140 | H681_04145 | NAD(P)H azoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.619 |
AGI22711.1 | AGI21959.1 | H681_04145 | H681_00385 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.465 |
AGI22711.1 | AGI22710.1 | H681_04145 | H681_04140 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | NAD(P)H azoreductase; COG0702 Predicted nucleoside-diphosphate-sugar epimerases. | 0.619 |
AGI22711.1 | AGI22737.1 | H681_04145 | H681_04275 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.550 |
AGI22711.1 | AGI23201.1 | H681_04145 | H681_06625 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.523 |
AGI22711.1 | AGI23255.1 | H681_04145 | H681_06895 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | COG2764 Uncharacterized protein conserved in bacteria. | 0.448 |
AGI22711.1 | AGI26648.1 | H681_04145 | H681_23905 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1396 Predicted transcriptional regulators. | 0.548 |
AGI22737.1 | AGI21959.1 | H681_04275 | H681_00385 | Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins. | AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.426 |
AGI22737.1 | AGI22711.1 | H681_04275 | H681_04145 | Transcriptional regulator MmsR; COG2207 AraC-type DNA-binding domain-containing proteins. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.550 |
AGI23201.1 | AGI22711.1 | H681_06625 | H681_04145 | Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.523 |
AGI23255.1 | AGI22711.1 | H681_06895 | H681_04145 | COG2764 Uncharacterized protein conserved in bacteria. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.448 |
AGI23255.1 | AGI26648.1 | H681_06895 | H681_23905 | COG2764 Uncharacterized protein conserved in bacteria. | COG1396 Predicted transcriptional regulators. | 0.674 |
AGI26648.1 | AGI22711.1 | H681_23905 | H681_04145 | COG1396 Predicted transcriptional regulators. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.548 |
AGI26648.1 | AGI23255.1 | H681_23905 | H681_06895 | COG1396 Predicted transcriptional regulators. | COG2764 Uncharacterized protein conserved in bacteria. | 0.674 |