STRINGSTRING
AGI22719.1 AGI22719.1 AGI22717.1 AGI22717.1 AGI22718.1 AGI22718.1 AGI22716.1 AGI22716.1 AGI26427.1 AGI26427.1 AGI25704.1 AGI25704.1 AGI25482.1 AGI25482.1 AGI22626.1 AGI22626.1 AGI22714.1 AGI22714.1 AGI22625.1 AGI22625.1 AGI22627.1 AGI22627.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22719.1ABC transporter substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (302 aa)    
Predicted Functional Partners:
AGI22717.1
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
 0.993
AGI22718.1
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
 0.992
AGI22716.1
ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.987
AGI26427.1
ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.498
AGI25704.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.496
AGI25482.1
COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.492
AGI22626.1
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.486
AGI22714.1
Two-component sensor; COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
  
 0.459
AGI22625.1
ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.450
AGI22627.1
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.445
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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