STRINGSTRING
AGI22776.1 AGI22776.1 AGI22052.1 AGI22052.1 AGI24502.1 AGI24502.1 AGI24452.1 AGI24452.1 AGI22775.1 AGI22775.1 AGI22773.1 AGI22773.1 AGI26439.1 AGI26439.1 AGI23137.1 AGI23137.1 AGI24166.1 AGI24166.1 AGI24777.1 AGI24777.1 AGI25007.1 AGI25007.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22776.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
AGI22052.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.607
AGI24502.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.588
AGI24452.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.533
AGI22775.1
COG2963 Transposase and inactivated derivatives.
       0.529
AGI22773.1
Transposase InsF for insertion sequence IS3A/B/C/D/E/fA; COG2801 Transposase and inactivated derivatives.
 
     0.518
AGI26439.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.518
AGI23137.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.516
AGI24166.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.515
AGI24777.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.479
AGI25007.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.471
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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