STRINGSTRING
AGI22876.1 AGI22876.1 AGI22875.1 AGI22875.1 AGI25452.1 AGI25452.1 AGI25911.1 AGI25911.1 AGI25757.1 AGI25757.1 AGI23609.1 AGI23609.1 AGI25755.1 AGI25755.1 AGI21988.1 AGI21988.1 AGI22020.1 AGI22020.1 AGI22261.1 AGI22261.1 AGI25758.1 AGI25758.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22876.1Signaling modulator of AmpD, AmpE; COG3725 Membrane protein required for beta-lactamase induction. (278 aa)    
Predicted Functional Partners:
AGI22875.1
N-acetyl-anhydromuranmyl-L-alanine amidase; COG3023 Negative regulator of beta-lactamase expression.
  
  
 0.831
AGI25452.1
COG3249 Uncharacterized protein conserved in bacteria.
  
     0.747
AGI25911.1
Hypothetical protein.
  
     0.738
AGI25757.1
Alginate-c5-mannuronan-epimerase AlgG.
  
     0.699
AGI23609.1
DNA binding-protein.
  
     0.686
AGI25755.1
Alginate biosynthetic protein AlgK; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
     0.683
AGI21988.1
Hypothetical protein.
  
     0.676
AGI22020.1
Hypothetical protein.
  
     0.671
AGI22261.1
Putative CheW protein.
  
     0.662
AGI25758.1
Alginate biosynthesis protein AlgX.
  
     0.654
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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