STRINGSTRING
AGI22922.1 AGI22922.1 AGI22915.1 AGI22915.1 AGI22914.1 AGI22914.1 dppF dppF AGI22913.1 AGI22913.1 AGI22921.1 AGI22921.1 AGI22923.1 AGI22923.1 AGI24037.1 AGI24037.1 AGI24038.1 AGI24038.1 cysA cysA AGI22916.1 AGI22916.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22922.1ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (533 aa)    
Predicted Functional Partners:
AGI22915.1
ABC transporter permease; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.978
AGI22914.1
ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.975
dppF
Dipeptide transporter ATP-binding subunit; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.967
AGI22913.1
ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.967
AGI22921.1
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  
 
0.769
AGI22923.1
Hypothetical protein; COG3471 Predicted periplasmic/secreted protein.
 
     0.540
AGI24037.1
ABC transporter substrate-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
  
 
 0.441
AGI24038.1
Solute-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
  
 
 0.441
cysA
Sulfate transport protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
   
 
  0.426
AGI22916.1
ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  
 
0.417
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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