STRINGSTRING
AGI22952.1 AGI22952.1 AGI22880.1 AGI22880.1 AGI22882.1 AGI22882.1 AGI22954.1 AGI22954.1 AGI26576.1 AGI26576.1 AGI22953.1 AGI22953.1 AGI22955.1 AGI22955.1 AGI22956.1 AGI22956.1 AGI24495.1 AGI24495.1 rpsG rpsG AGI22881.1 AGI22881.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI22952.1COG1925 Phosphotransferase system, HPr-related proteins. (90 aa)    
Predicted Functional Partners:
AGI22880.1
Multiphosphoryl transfer protein; COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; Belongs to the PEP-utilizing enzyme family.
 
 0.999
AGI22882.1
PTS system fructose-specific transporter subunits IIBC; COG1445 Phosphotransferase system fructose-specific component IIB.
 
 
 0.988
AGI22954.1
Nitrogen regulatory IIA protein; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
  
 0.948
AGI26576.1
Phosphoenolpyruvate-protein phosphotransferase PtsP; COG3605 Signal transduction protein containing GAF and PtsI domains; Belongs to the PEP-utilizing enzyme family.
  
 
 
 0.937
AGI22953.1
glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities.
  
  
 0.823
AGI22955.1
Ribosomal subunit interface protein; COG1544 Ribosome-associated protein Y (PSrp-1).
 
  
 0.811
AGI22956.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.717
AGI24495.1
COG1609 Transcriptional regulators.
 
 
 
 0.685
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
  
 0.657
AGI22881.1
1-phosphofructokinase; COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); Belongs to the carbohydrate kinase PfkB family.
 
  
 0.655
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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