STRINGSTRING
AGI22963.1 AGI22963.1 AGI22964.1 AGI22964.1 AGI22962.1 AGI22962.1 AGI25474.1 AGI25474.1 AGI22966.1 AGI22966.1 AGI22965.1 AGI22965.1 AGI25475.1 AGI25475.1 AGI25473.1 AGI25473.1 AGI22957.1 AGI22957.1 AGI22961.1 AGI22961.1 AGI23658.1 AGI23658.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AGI22963.1ABC transporter permease; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component. (265 aa)    
Predicted Functional Partners:
AGI22964.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
 
 0.998
AGI22962.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.997
AGI25474.1
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.973
AGI22966.1
Anti-sigma-factor antagonist.
  
 0.965
AGI22965.1
Toluene tolerance protein; COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 
 0.964
AGI25475.1
ABC transporter substrate-binding protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
  
 0.947
AGI25473.1
Putative ABC transporter permease; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
  
 
0.920
AGI22957.1
ABC transporter ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
 
  
  0.740
AGI22961.1
Hypothetical protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation.
 
     0.659
AGI23658.1
Antisigma-factor antagonist STAS domain-containing protein; COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
   
   0.595
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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