STRINGSTRING
AGI23046.1 AGI23046.1 AGI23048.1 AGI23048.1 AGI23049.1 AGI23049.1 AGI23044.1 AGI23044.1 AGI23047.1 AGI23047.1 AGI23050.1 AGI23050.1 AGI23045.1 AGI23045.1 AGI23055.1 AGI23055.1 AGI23052.1 AGI23052.1 AGI23043.1 AGI23043.1 AGI23051.1 AGI23051.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23046.1Protein TadZ; COG4963 Flp pilus assembly protein, ATPase CpaE. (394 aa)    
Predicted Functional Partners:
AGI23048.1
COG4965 Flp pilus assembly protein TadB.
 
  
 0.991
AGI23049.1
COG2064 Flp pilus assembly protein TadC.
 
  
 0.986
AGI23044.1
COG3745 Flp pilus assembly protein CpaB.
 
  
 0.981
AGI23047.1
TadA ATPase; COG4962 Flp pilus assembly protein, ATPase CpaF.
 
  
 0.967
AGI23050.1
Putative lipoprotein; COG5010 Flp pilus assembly protein TadD, contains TPR repeats.
 
  
 0.966
AGI23045.1
Putative type II secretion system protein; COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.961
AGI23055.1
Putative pilus assembly protein.
 
  
 0.954
AGI23052.1
COG4655 Predicted membrane protein.
 
  
 0.941
AGI23043.1
COG3847 Flp pilus assembly protein, pilin Flp.
 
  
 0.864
AGI23051.1
Hypothetical protein.
  
  
 0.831
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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