STRINGSTRING
AGI23063.1 AGI23063.1 AGI23062.1 AGI23062.1 AGI23415.1 AGI23415.1 AGI22729.1 AGI22729.1 AGI23141.1 AGI23141.1 AGI23414.1 AGI23414.1 AGI23156.1 AGI23156.1 AGI24340.1 AGI24340.1 AGI24836.1 AGI24836.1 gcvP gcvP AGI23061.1 AGI23061.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23063.1COG1937 Uncharacterized protein conserved in bacteria. (91 aa)    
Predicted Functional Partners:
AGI23062.1
Cation diffusion facilitator family transporter; COG1230 Co/Zn/Cd efflux system component.
 
  
 0.830
AGI23415.1
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.704
AGI22729.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.687
AGI23141.1
Heavy metal translocating p-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.687
AGI23414.1
COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
  
 0.657
AGI23156.1
COG1062 Zn-dependent alcohol dehydrogenases, class III.
  
  
 0.609
AGI24340.1
COG1062 Zn-dependent alcohol dehydrogenases, class III.
  
  
 0.609
AGI24836.1
CzcB family heavy metal RND efflux membrane fusion protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.457
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.429
AGI23061.1
COG0564 Pseudouridylate synthases, 23S RNA-specific.
       0.419
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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