STRINGSTRING
AGI23100.1 AGI23100.1 AGI23099.1 AGI23099.1 AGI23101.1 AGI23101.1 AGI23097.1 AGI23097.1 AGI23098.1 AGI23098.1 AGI22554.1 AGI22554.1 AGI26307.1 AGI26307.1 AGI22286.1 AGI22286.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23100.1Hypothetical protein; COG4319 Ketosteroid isomerase homolog. (144 aa)    
Predicted Functional Partners:
AGI23099.1
COG4312 Uncharacterized protein conserved in bacteria.
 
     0.824
AGI23101.1
COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family.
 
     0.675
AGI23097.1
COG3795 Uncharacterized protein conserved in bacteria.
 
     0.614
AGI23098.1
Hypothetical protein.
       0.426
AGI22554.1
COG3795 Uncharacterized protein conserved in bacteria.
 
     0.413
AGI26307.1
HDOD domain-contain protein.
  
     0.401
AGI22286.1
COG1309 Transcriptional regulator.
  
     0.400
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (24%) [HD]