Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22286.1 | AGI23100.1 | H681_02020 | H681_06100 | COG1309 Transcriptional regulator. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.400 |
AGI22554.1 | AGI23098.1 | H681_03360 | H681_06090 | COG3795 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.443 |
AGI22554.1 | AGI23099.1 | H681_03360 | H681_06095 | COG3795 Uncharacterized protein conserved in bacteria. | COG4312 Uncharacterized protein conserved in bacteria. | 0.511 |
AGI22554.1 | AGI23100.1 | H681_03360 | H681_06100 | COG3795 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.413 |
AGI22554.1 | AGI23101.1 | H681_03360 | H681_06105 | COG3795 Uncharacterized protein conserved in bacteria. | COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family. | 0.789 |
AGI23097.1 | AGI23098.1 | H681_06085 | H681_06090 | COG3795 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.812 |
AGI23097.1 | AGI23099.1 | H681_06085 | H681_06095 | COG3795 Uncharacterized protein conserved in bacteria. | COG4312 Uncharacterized protein conserved in bacteria. | 0.685 |
AGI23097.1 | AGI23100.1 | H681_06085 | H681_06100 | COG3795 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.614 |
AGI23097.1 | AGI23101.1 | H681_06085 | H681_06105 | COG3795 Uncharacterized protein conserved in bacteria. | COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family. | 0.833 |
AGI23098.1 | AGI22554.1 | H681_06090 | H681_03360 | Hypothetical protein. | COG3795 Uncharacterized protein conserved in bacteria. | 0.443 |
AGI23098.1 | AGI23097.1 | H681_06090 | H681_06085 | Hypothetical protein. | COG3795 Uncharacterized protein conserved in bacteria. | 0.812 |
AGI23098.1 | AGI23099.1 | H681_06090 | H681_06095 | Hypothetical protein. | COG4312 Uncharacterized protein conserved in bacteria. | 0.470 |
AGI23098.1 | AGI23100.1 | H681_06090 | H681_06100 | Hypothetical protein. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.426 |
AGI23098.1 | AGI23101.1 | H681_06090 | H681_06105 | Hypothetical protein. | COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family. | 0.619 |
AGI23099.1 | AGI22554.1 | H681_06095 | H681_03360 | COG4312 Uncharacterized protein conserved in bacteria. | COG3795 Uncharacterized protein conserved in bacteria. | 0.511 |
AGI23099.1 | AGI23097.1 | H681_06095 | H681_06085 | COG4312 Uncharacterized protein conserved in bacteria. | COG3795 Uncharacterized protein conserved in bacteria. | 0.685 |
AGI23099.1 | AGI23098.1 | H681_06095 | H681_06090 | COG4312 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.470 |
AGI23099.1 | AGI23100.1 | H681_06095 | H681_06100 | COG4312 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | 0.824 |
AGI23099.1 | AGI23101.1 | H681_06095 | H681_06105 | COG4312 Uncharacterized protein conserved in bacteria. | COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain; Belongs to the sigma-70 factor family. | 0.686 |
AGI23100.1 | AGI22286.1 | H681_06100 | H681_02020 | Hypothetical protein; COG4319 Ketosteroid isomerase homolog. | COG1309 Transcriptional regulator. | 0.400 |
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