STRINGSTRING
AGI23105.1 AGI23105.1 nuoC nuoC AGI25078.1 AGI25078.1 AGI25485.1 AGI25485.1 AGI23106.1 AGI23106.1 AGI25075.1 AGI25075.1 AGI24161.1 AGI24161.1 AGI23720.1 AGI23720.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23105.1Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (257 aa)    
Predicted Functional Partners:
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.752
AGI25078.1
COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
 0.503
AGI25485.1
COG4122 Predicted O-methyltransferase.
  
 
 0.436
AGI23106.1
Glutamine amidopeptidase (class I); COG2071 Predicted glutamine amidotransferases.
       0.427
AGI25075.1
3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.416
AGI24161.1
ABC transporter transmembrane protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 0.411
AGI23720.1
ABC transporter permease; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
 
 0.402
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.