STRINGSTRING
AGI23128.1 AGI23128.1 AGI26307.1 AGI26307.1 AGI26030.1 AGI26030.1 AGI26032.1 AGI26032.1 AGI26031.1 AGI26031.1 AGI23129.1 AGI23129.1 AGI26314.1 AGI26314.1 AGI24231.1 AGI24231.1 AGI24120.1 AGI24120.1 AGI23858.1 AGI23858.1 AGI24121.1 AGI24121.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23128.1COG3619 Predicted membrane protein. (233 aa)    
Predicted Functional Partners:
AGI26307.1
HDOD domain-contain protein.
  
     0.749
AGI26030.1
Hypothetical protein.
  
     0.733
AGI26032.1
Hypothetical protein; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.733
AGI26031.1
Hypothetical protein.
  
     0.695
AGI23129.1
Hypothetical protein.
       0.678
AGI26314.1
HAMP domain-containing protein.
  
     0.604
AGI24231.1
Hypothetical protein.
  
     0.568
AGI24120.1
Heme utilization protein; COG3230 Heme oxygenase.
  
     0.555
AGI23858.1
Putative ABC transporter substrate-binding protein; COG2984 ABC-type uncharacterized transport system, periplasmic component.
  
     0.545
AGI24121.1
TonB-dependent hemoglobin/transferrin/lactoferrin receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.508
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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