Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23181.1 | AGI23182.1 | H681_06525 | H681_06530 | COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.849 |
AGI23181.1 | AGI23183.1 | H681_06525 | H681_06535 | COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.573 |
AGI23181.1 | AGI23184.1 | H681_06525 | H681_06540 | COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.573 |
AGI23182.1 | AGI23181.1 | H681_06530 | H681_06525 | Hypothetical protein. | COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | 0.849 |
AGI23182.1 | AGI23183.1 | H681_06530 | H681_06535 | Hypothetical protein. | Hypothetical protein. | 0.573 |
AGI23182.1 | AGI23184.1 | H681_06530 | H681_06540 | Hypothetical protein. | Hypothetical protein. | 0.573 |
AGI23183.1 | AGI23181.1 | H681_06535 | H681_06525 | Hypothetical protein. | COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | 0.573 |
AGI23183.1 | AGI23182.1 | H681_06535 | H681_06530 | Hypothetical protein. | Hypothetical protein. | 0.573 |
AGI23183.1 | AGI23184.1 | H681_06535 | H681_06540 | Hypothetical protein. | Hypothetical protein. | 0.800 |
AGI23183.1 | AGI23185.1 | H681_06535 | H681_06545 | Hypothetical protein. | COG3776 Predicted membrane protein. | 0.413 |
AGI23184.1 | AGI23181.1 | H681_06540 | H681_06525 | Hypothetical protein. | COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family. | 0.573 |
AGI23184.1 | AGI23182.1 | H681_06540 | H681_06530 | Hypothetical protein. | Hypothetical protein. | 0.573 |
AGI23184.1 | AGI23183.1 | H681_06540 | H681_06535 | Hypothetical protein. | Hypothetical protein. | 0.800 |
AGI23184.1 | AGI23185.1 | H681_06540 | H681_06545 | Hypothetical protein. | COG3776 Predicted membrane protein. | 0.413 |
AGI23185.1 | AGI23183.1 | H681_06545 | H681_06535 | COG3776 Predicted membrane protein. | Hypothetical protein. | 0.413 |
AGI23185.1 | AGI23184.1 | H681_06545 | H681_06540 | COG3776 Predicted membrane protein. | Hypothetical protein. | 0.413 |