STRINGSTRING
AGI23187.1 AGI23187.1 AGI23186.1 AGI23186.1 AGI24813.1 AGI24813.1 AGI24786.1 AGI24786.1 AGI24785.1 AGI24785.1 AGI24826.1 AGI24826.1 AGI23188.1 AGI23188.1 AGI23189.1 AGI23189.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23187.1SDS hydrolase SdsA1; COG2015 Alkyl sulfatase and related hydrolases. (657 aa)    
Predicted Functional Partners:
AGI23186.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.546
AGI24813.1
COG3119 Arylsulfatase A and related enzymes.
   
 0.543
AGI24786.1
Hypothetical protein.
 
     0.534
AGI24785.1
Hypothetical protein.
 
     0.523
AGI24826.1
Hypothetical protein.
 
     0.482
AGI23188.1
Cysteine peptidase; COG3672 Predicted periplasmic protein.
       0.481
AGI23189.1
Protein LapD; COG2199 FOG: GGDEF domain.
       0.459
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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