STRINGSTRING
AGI23197.1 AGI23197.1 AGI23198.1 AGI23198.1 AGI24557.1 AGI24557.1 AGI22033.1 AGI22033.1 AGI25406.1 AGI25406.1 AGI23199.1 AGI23199.1 AGI23196.1 AGI23196.1 AGI23200.1 AGI23200.1 AGI22130.1 AGI22130.1 AGI24154.1 AGI24154.1 AGI22937.1 AGI22937.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
AGI23197.1COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; Belongs to the HIBADH-related family. (294 aa)    
Predicted Functional Partners:
AGI23198.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.967
AGI24557.1
Methylmalonate semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.753
AGI22033.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.694
AGI25406.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
 
 0.692
AGI23199.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.680
AGI23196.1
Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
  
    0.583
AGI23200.1
COG1960 Acyl-CoA dehydrogenases.
 
  
 0.530
AGI22130.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.499
AGI24154.1
hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
 
  
 0.447
AGI22937.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.410
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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