STRINGSTRING
AGI23231.1 AGI23231.1 AGI23232.1 AGI23232.1 AGI26863.1 AGI26863.1 AGI26475.1 AGI26475.1 AGI26476.1 AGI26476.1 AGI25057.1 AGI25057.1 AGI23230.1 AGI23230.1 AGI23233.1 AGI23233.1 AGI23659.1 AGI23659.1 AGI24921.1 AGI24921.1 AGI25124.1 AGI25124.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23231.1Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (249 aa)    
Predicted Functional Partners:
AGI23232.1
COG3714 Predicted membrane protein.
       0.773
AGI26863.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.696
AGI26475.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.670
AGI26476.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.656
AGI25057.1
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.584
AGI23230.1
Hypothetical protein.
       0.529
AGI23233.1
Inhibitor of cysteine peptidase; COG5513 Predicted secreted protein.
       0.522
AGI23659.1
Two-component response regulator; COG0784 FOG: CheY-like receiver.
  
     0.449
AGI24921.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.447
AGI25124.1
Hypothetical protein.
  
     0.417
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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