Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23253.1 | AGI23254.1 | H681_06885 | H681_06890 | Hypothetical protein. | Cupin; COG0662 Mannose-6-phosphate isomerase. | 0.449 |
AGI23254.1 | AGI23253.1 | H681_06890 | H681_06885 | Cupin; COG0662 Mannose-6-phosphate isomerase. | Hypothetical protein. | 0.449 |
AGI23254.1 | AGI23255.1 | H681_06890 | H681_06895 | Cupin; COG0662 Mannose-6-phosphate isomerase. | COG2764 Uncharacterized protein conserved in bacteria. | 0.513 |
AGI23254.1 | AGI24112.1 | H681_06890 | H681_11210 | Cupin; COG0662 Mannose-6-phosphate isomerase. | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.421 |
AGI23254.1 | AGI26623.1 | H681_06890 | H681_23780 | Cupin; COG0662 Mannose-6-phosphate isomerase. | COG2148 Sugar transferases involved in lipopolysaccharide synthesis. | 0.603 |
AGI23255.1 | AGI23254.1 | H681_06895 | H681_06890 | COG2764 Uncharacterized protein conserved in bacteria. | Cupin; COG0662 Mannose-6-phosphate isomerase. | 0.513 |
AGI24112.1 | AGI23254.1 | H681_11210 | H681_06890 | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Cupin; COG0662 Mannose-6-phosphate isomerase. | 0.421 |
AGI26623.1 | AGI23254.1 | H681_23780 | H681_06890 | COG2148 Sugar transferases involved in lipopolysaccharide synthesis. | Cupin; COG0662 Mannose-6-phosphate isomerase. | 0.603 |