STRINGSTRING
AGI23255.1 AGI23255.1 AGI26648.1 AGI26648.1 AGI24519.1 AGI24519.1 AGI23254.1 AGI23254.1 AGI24679.1 AGI24679.1 AGI22711.1 AGI22711.1 AGI24688.1 AGI24688.1 AGI24281.1 AGI24281.1 AGI23099.1 AGI23099.1 AGI23097.1 AGI23097.1 AGI23256.1 AGI23256.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23255.1COG2764 Uncharacterized protein conserved in bacteria. (142 aa)    
Predicted Functional Partners:
AGI26648.1
COG1396 Predicted transcriptional regulators.
  
    0.674
AGI24519.1
COG3554 Uncharacterized protein conserved in bacteria.
 
     0.554
AGI23254.1
Cupin; COG0662 Mannose-6-phosphate isomerase.
       0.513
AGI24679.1
DGPFAETKE family protein; COG3795 Uncharacterized protein conserved in bacteria.
 
    0.475
AGI22711.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
    0.448
AGI24688.1
Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases.
 
  
 0.430
AGI24281.1
COG1309 Transcriptional regulator.
 
    0.427
AGI23099.1
COG4312 Uncharacterized protein conserved in bacteria.
 
     0.422
AGI23097.1
COG3795 Uncharacterized protein conserved in bacteria.
 
    0.416
AGI23256.1
TonB-dependent outermembrane receptor; COG4206 Outer membrane cobalamin receptor protein.
       0.409
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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