Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22711.1 | AGI23255.1 | H681_04145 | H681_06895 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | COG2764 Uncharacterized protein conserved in bacteria. | 0.448 |
AGI22711.1 | AGI26648.1 | H681_04145 | H681_23905 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | COG1396 Predicted transcriptional regulators. | 0.548 |
AGI23097.1 | AGI23099.1 | H681_06085 | H681_06095 | COG3795 Uncharacterized protein conserved in bacteria. | COG4312 Uncharacterized protein conserved in bacteria. | 0.685 |
AGI23097.1 | AGI23255.1 | H681_06085 | H681_06895 | COG3795 Uncharacterized protein conserved in bacteria. | COG2764 Uncharacterized protein conserved in bacteria. | 0.416 |
AGI23097.1 | AGI24679.1 | H681_06085 | H681_14045 | COG3795 Uncharacterized protein conserved in bacteria. | DGPFAETKE family protein; COG3795 Uncharacterized protein conserved in bacteria. | 0.817 |
AGI23099.1 | AGI23097.1 | H681_06095 | H681_06085 | COG4312 Uncharacterized protein conserved in bacteria. | COG3795 Uncharacterized protein conserved in bacteria. | 0.685 |
AGI23099.1 | AGI23255.1 | H681_06095 | H681_06895 | COG4312 Uncharacterized protein conserved in bacteria. | COG2764 Uncharacterized protein conserved in bacteria. | 0.422 |
AGI23099.1 | AGI24679.1 | H681_06095 | H681_14045 | COG4312 Uncharacterized protein conserved in bacteria. | DGPFAETKE family protein; COG3795 Uncharacterized protein conserved in bacteria. | 0.458 |
AGI23254.1 | AGI23255.1 | H681_06890 | H681_06895 | Cupin; COG0662 Mannose-6-phosphate isomerase. | COG2764 Uncharacterized protein conserved in bacteria. | 0.513 |
AGI23255.1 | AGI22711.1 | H681_06895 | H681_04145 | COG2764 Uncharacterized protein conserved in bacteria. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.448 |
AGI23255.1 | AGI23097.1 | H681_06895 | H681_06085 | COG2764 Uncharacterized protein conserved in bacteria. | COG3795 Uncharacterized protein conserved in bacteria. | 0.416 |
AGI23255.1 | AGI23099.1 | H681_06895 | H681_06095 | COG2764 Uncharacterized protein conserved in bacteria. | COG4312 Uncharacterized protein conserved in bacteria. | 0.422 |
AGI23255.1 | AGI23254.1 | H681_06895 | H681_06890 | COG2764 Uncharacterized protein conserved in bacteria. | Cupin; COG0662 Mannose-6-phosphate isomerase. | 0.513 |
AGI23255.1 | AGI23256.1 | H681_06895 | H681_06900 | COG2764 Uncharacterized protein conserved in bacteria. | TonB-dependent outermembrane receptor; COG4206 Outer membrane cobalamin receptor protein. | 0.409 |
AGI23255.1 | AGI24281.1 | H681_06895 | H681_12055 | COG2764 Uncharacterized protein conserved in bacteria. | COG1309 Transcriptional regulator. | 0.427 |
AGI23255.1 | AGI24519.1 | H681_06895 | H681_13245 | COG2764 Uncharacterized protein conserved in bacteria. | COG3554 Uncharacterized protein conserved in bacteria. | 0.554 |
AGI23255.1 | AGI24679.1 | H681_06895 | H681_14045 | COG2764 Uncharacterized protein conserved in bacteria. | DGPFAETKE family protein; COG3795 Uncharacterized protein conserved in bacteria. | 0.475 |
AGI23255.1 | AGI24688.1 | H681_06895 | H681_14090 | COG2764 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | 0.430 |
AGI23255.1 | AGI26648.1 | H681_06895 | H681_23905 | COG2764 Uncharacterized protein conserved in bacteria. | COG1396 Predicted transcriptional regulators. | 0.674 |
AGI23256.1 | AGI23255.1 | H681_06900 | H681_06895 | TonB-dependent outermembrane receptor; COG4206 Outer membrane cobalamin receptor protein. | COG2764 Uncharacterized protein conserved in bacteria. | 0.409 |
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