STRINGSTRING
AGI23261.1 AGI23261.1 AGI23262.1 AGI23262.1 AGI23260.1 AGI23260.1 AGI23263.1 AGI23263.1 nuoC nuoC AGI23264.1 AGI23264.1 sdhB sdhB AGI22464.1 AGI22464.1 AGI22837.1 AGI22837.1 AGI24082.1 AGI24082.1 AGI24509.1 AGI24509.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23261.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
AGI23262.1
O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis.
       0.773
AGI23260.1
Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
  
 0.632
AGI23263.1
Hypothetical protein; Belongs to the UPF0311 family.
       0.582
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.494
AGI23264.1
Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria.
       0.461
sdhB
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
   
 
 0.428
AGI22464.1
COG0753 Catalase; Belongs to the catalase family.
  
 
 0.405
AGI22837.1
Hypothetical protein; COG0753 Catalase.
  
 
 0.405
AGI24082.1
Hypothetical protein; COG0753 Catalase.
  
 
 0.405
AGI24509.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 
 0.405
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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