Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23261.1 | AGI23262.1 | H681_06925 | H681_06930 | Hypothetical protein. | O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis. | 0.773 |
AGI23261.1 | AGI23263.1 | H681_06925 | H681_06935 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0311 family. | 0.582 |
AGI23261.1 | AGI23264.1 | H681_06925 | H681_06940 | Hypothetical protein. | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | 0.461 |
AGI23262.1 | AGI23261.1 | H681_06930 | H681_06925 | O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis. | Hypothetical protein. | 0.773 |
AGI23262.1 | AGI23263.1 | H681_06930 | H681_06935 | O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis. | Hypothetical protein; Belongs to the UPF0311 family. | 0.576 |
AGI23262.1 | AGI23264.1 | H681_06930 | H681_06940 | O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis. | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | 0.461 |
AGI23263.1 | AGI23261.1 | H681_06935 | H681_06925 | Hypothetical protein; Belongs to the UPF0311 family. | Hypothetical protein. | 0.582 |
AGI23263.1 | AGI23262.1 | H681_06935 | H681_06930 | Hypothetical protein; Belongs to the UPF0311 family. | O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis. | 0.576 |
AGI23263.1 | AGI23264.1 | H681_06935 | H681_06940 | Hypothetical protein; Belongs to the UPF0311 family. | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | 0.608 |
AGI23263.1 | AGI23265.1 | H681_06935 | H681_06945 | Hypothetical protein; Belongs to the UPF0311 family. | RNA polymerase ECF-subfamily sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.412 |
AGI23263.1 | AGI23266.1 | H681_06935 | H681_06950 | Hypothetical protein; Belongs to the UPF0311 family. | Putative transmembrane sensor; COG3712 Fe2+-dicitrate sensor, membrane component. | 0.412 |
AGI23264.1 | AGI23261.1 | H681_06940 | H681_06925 | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.461 |
AGI23264.1 | AGI23262.1 | H681_06940 | H681_06930 | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | O-methyltransferase domain-containing protein; COG3315 O-Methyltransferase involved in polyketide biosynthesis. | 0.461 |
AGI23264.1 | AGI23263.1 | H681_06940 | H681_06935 | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | Hypothetical protein; Belongs to the UPF0311 family. | 0.608 |
AGI23264.1 | AGI23265.1 | H681_06940 | H681_06945 | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | RNA polymerase ECF-subfamily sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.509 |
AGI23264.1 | AGI23266.1 | H681_06940 | H681_06950 | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | Putative transmembrane sensor; COG3712 Fe2+-dicitrate sensor, membrane component. | 0.509 |
AGI23265.1 | AGI23263.1 | H681_06945 | H681_06935 | RNA polymerase ECF-subfamily sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Belongs to the UPF0311 family. | 0.412 |
AGI23265.1 | AGI23264.1 | H681_06945 | H681_06940 | RNA polymerase ECF-subfamily sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Thiol-disulfide oxidoreductase; COG3011 Uncharacterized protein conserved in bacteria. | 0.509 |
AGI23265.1 | AGI23266.1 | H681_06945 | H681_06950 | RNA polymerase ECF-subfamily sigma-70 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | Putative transmembrane sensor; COG3712 Fe2+-dicitrate sensor, membrane component. | 0.965 |
AGI23266.1 | AGI23263.1 | H681_06950 | H681_06935 | Putative transmembrane sensor; COG3712 Fe2+-dicitrate sensor, membrane component. | Hypothetical protein; Belongs to the UPF0311 family. | 0.412 |
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