Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI22947.1 | AGI22966.1 | H681_05335 | H681_05430 | COG3164 Predicted membrane protein. | Anti-sigma-factor antagonist. | 0.664 |
AGI22947.1 | AGI23327.1 | H681_05335 | H681_07255 | COG3164 Predicted membrane protein. | COG5608 Conserved secreted protein. | 0.582 |
AGI22947.1 | AGI23609.1 | H681_05335 | H681_08675 | COG3164 Predicted membrane protein. | DNA binding-protein. | 0.626 |
AGI22947.1 | AGI24977.1 | H681_05335 | H681_15545 | COG3164 Predicted membrane protein. | Hypothetical protein. | 0.722 |
AGI22947.1 | AGI25373.1 | H681_05335 | H681_17525 | COG3164 Predicted membrane protein. | COG4775 Outer membrane protein/protective antigen OMA87. | 0.627 |
AGI22947.1 | AGI25838.1 | H681_05335 | H681_19855 | COG3164 Predicted membrane protein. | COG3141 Uncharacterized protein conserved in bacteria. | 0.630 |
AGI22966.1 | AGI22947.1 | H681_05430 | H681_05335 | Anti-sigma-factor antagonist. | COG3164 Predicted membrane protein. | 0.664 |
AGI22966.1 | AGI23327.1 | H681_05430 | H681_07255 | Anti-sigma-factor antagonist. | COG5608 Conserved secreted protein. | 0.556 |
AGI22966.1 | AGI23609.1 | H681_05430 | H681_08675 | Anti-sigma-factor antagonist. | DNA binding-protein. | 0.657 |
AGI22966.1 | AGI24977.1 | H681_05430 | H681_15545 | Anti-sigma-factor antagonist. | Hypothetical protein. | 0.693 |
AGI22966.1 | AGI25373.1 | H681_05430 | H681_17525 | Anti-sigma-factor antagonist. | COG4775 Outer membrane protein/protective antigen OMA87. | 0.757 |
AGI22966.1 | AGI25838.1 | H681_05430 | H681_19855 | Anti-sigma-factor antagonist. | COG3141 Uncharacterized protein conserved in bacteria. | 0.606 |
AGI23325.1 | AGI23326.1 | H681_07245 | H681_07250 | Putative penicillin amidase; COG2366 Protein related to penicillin acylase. | SecC motif-containing protein; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase). | 0.498 |
AGI23325.1 | AGI23327.1 | H681_07245 | H681_07255 | Putative penicillin amidase; COG2366 Protein related to penicillin acylase. | COG5608 Conserved secreted protein. | 0.599 |
AGI23325.1 | AGI23328.1 | H681_07245 | H681_07260 | Putative penicillin amidase; COG2366 Protein related to penicillin acylase. | Hypothetical protein. | 0.426 |
AGI23325.1 | AGI25373.1 | H681_07245 | H681_17525 | Putative penicillin amidase; COG2366 Protein related to penicillin acylase. | COG4775 Outer membrane protein/protective antigen OMA87. | 0.556 |
AGI23326.1 | AGI23325.1 | H681_07250 | H681_07245 | SecC motif-containing protein; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase). | Putative penicillin amidase; COG2366 Protein related to penicillin acylase. | 0.498 |
AGI23326.1 | AGI23327.1 | H681_07250 | H681_07255 | SecC motif-containing protein; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase). | COG5608 Conserved secreted protein. | 0.800 |
AGI23326.1 | AGI23328.1 | H681_07250 | H681_07260 | SecC motif-containing protein; COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase). | Hypothetical protein. | 0.531 |
AGI23327.1 | AGI22947.1 | H681_07255 | H681_05335 | COG5608 Conserved secreted protein. | COG3164 Predicted membrane protein. | 0.582 |
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