STRINGSTRING
AGI23338.1 AGI23338.1 AGI23337.1 AGI23337.1 AGI25838.1 AGI25838.1 dinG dinG AGI23339.1 AGI23339.1 ampC ampC AGI25791.1 AGI25791.1 AGI23870.1 AGI23870.1 AGI24443.1 AGI24443.1 AGI26595.1 AGI26595.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23338.1Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. (381 aa)    
Predicted Functional Partners:
AGI23337.1
Hypothetical protein.
 
     0.678
AGI25838.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.503
dinG
ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase.
     
 0.458
AGI23339.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
     
 0.451
ampC
beta-lactamase/D-alanine carboxypeptidase; COG1680 Beta-lactamase class C and other penicillin binding proteins.
  
     0.444
AGI25791.1
COG3141 Uncharacterized protein conserved in bacteria.
  
     0.443
AGI23870.1
Hypothetical protein.
  
   
 0.427
AGI24443.1
PpsD; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.420
AGI26595.1
Transcriptional regulator; COG3204 Uncharacterized protein conserved in bacteria.
  
     0.405
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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