Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI23337.1 | AGI23338.1 | H681_07305 | H681_07310 | Hypothetical protein. | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.678 |
AGI23337.1 | AGI23870.1 | H681_07305 | H681_09980 | Hypothetical protein. | Hypothetical protein. | 0.555 |
AGI23337.1 | AGI25791.1 | H681_07305 | H681_19620 | Hypothetical protein. | COG3141 Uncharacterized protein conserved in bacteria. | 0.530 |
AGI23337.1 | AGI25838.1 | H681_07305 | H681_19855 | Hypothetical protein. | COG3141 Uncharacterized protein conserved in bacteria. | 0.605 |
AGI23337.1 | dinG | H681_07305 | H681_07300 | Hypothetical protein. | ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.576 |
AGI23338.1 | AGI23337.1 | H681_07310 | H681_07305 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | Hypothetical protein. | 0.678 |
AGI23338.1 | AGI23339.1 | H681_07310 | H681_07315 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.451 |
AGI23338.1 | AGI23870.1 | H681_07310 | H681_09980 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | Hypothetical protein. | 0.427 |
AGI23338.1 | AGI24443.1 | H681_07310 | H681_12865 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | PpsD; COG1020 Non-ribosomal peptide synthetase modules and related proteins. | 0.420 |
AGI23338.1 | AGI25791.1 | H681_07310 | H681_19620 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | COG3141 Uncharacterized protein conserved in bacteria. | 0.443 |
AGI23338.1 | AGI25838.1 | H681_07310 | H681_19855 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | COG3141 Uncharacterized protein conserved in bacteria. | 0.503 |
AGI23338.1 | AGI26595.1 | H681_07310 | H681_23640 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | Transcriptional regulator; COG3204 Uncharacterized protein conserved in bacteria. | 0.405 |
AGI23338.1 | ampC | H681_07310 | H681_14430 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | beta-lactamase/D-alanine carboxypeptidase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.444 |
AGI23338.1 | dinG | H681_07310 | H681_07300 | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.458 |
AGI23339.1 | AGI23338.1 | H681_07315 | H681_07310 | COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.451 |
AGI23870.1 | AGI23337.1 | H681_09980 | H681_07305 | Hypothetical protein. | Hypothetical protein. | 0.555 |
AGI23870.1 | AGI23338.1 | H681_09980 | H681_07310 | Hypothetical protein. | Esterase; COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.427 |
AGI23870.1 | AGI25791.1 | H681_09980 | H681_19620 | Hypothetical protein. | COG3141 Uncharacterized protein conserved in bacteria. | 0.703 |
AGI23870.1 | AGI25838.1 | H681_09980 | H681_19855 | Hypothetical protein. | COG3141 Uncharacterized protein conserved in bacteria. | 0.701 |
AGI23870.1 | AGI26595.1 | H681_09980 | H681_23640 | Hypothetical protein. | Transcriptional regulator; COG3204 Uncharacterized protein conserved in bacteria. | 0.532 |
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