STRINGSTRING
AGI23374.1 AGI23374.1 AGI23375.1 AGI23375.1 AGI25320.1 AGI25320.1 AGI23870.1 AGI23870.1 AGI25688.1 AGI25688.1 AGI25922.1 AGI25922.1 AGI24977.1 AGI24977.1 AGI23397.1 AGI23397.1 AGI24364.1 AGI24364.1 AGI24053.1 AGI24053.1 AGI25792.1 AGI25792.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23374.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
AGI23375.1
COG0500 SAM-dependent methyltransferases.
       0.795
AGI25320.1
COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; Belongs to the UPF0149 family.
  
     0.773
AGI23870.1
Hypothetical protein.
  
     0.756
AGI25688.1
COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
    0.736
AGI25922.1
Transcriptional regulator MvaT, P16 subunit.
  
     0.733
AGI24977.1
Hypothetical protein.
  
     0.726
AGI23397.1
COG2825 Outer membrane protein.
  
     0.722
AGI24364.1
Transcriptional regulator MvaV; COG4992 Ornithine/acetylornithine aminotransferase.
  
     0.717
AGI24053.1
COG3255 Putative sterol carrier protein.
  
     0.711
AGI25792.1
Putative regulatory protein; COG0776 Bacterial nucleoid DNA-binding protein.
  
     0.707
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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