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AGI23420.1 AGI23420.1 AGI26736.1 AGI26736.1 AGI25625.1 AGI25625.1 rpoS rpoS AGI22221.1 AGI22221.1 AGI26299.1 AGI26299.1 AGI24039.1 AGI24039.1 AGI22417.1 AGI22417.1 rlpA rlpA AGI25996.1 AGI25996.1 hfq hfq
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI23420.1Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases. (92 aa)    
Predicted Functional Partners:
AGI26736.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
  
 0.819
AGI25625.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
  
 0.803
rpoS
RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
  
  
 0.740
AGI22221.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.733
AGI26299.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.690
AGI24039.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
  
 0.574
AGI22417.1
COG0739 Membrane proteins related to metalloendopeptidases.
 
  
0.558
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
  
 0.552
AGI25996.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.508
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
 
  
 0.504
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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