STRINGSTRING
AGI23438.1 AGI23438.1 AGI23439.1 AGI23439.1 AGI25497.1 AGI25497.1 AGI23037.1 AGI23037.1 AGI23701.1 AGI23701.1 AGI23475.1 AGI23475.1 AGI23038.1 AGI23038.1 nuoC nuoC AGI26353.1 AGI26353.1 AGI23939.1 AGI23939.1 AGI24749.1 AGI24749.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI23438.1Ring-cleaving dioxygenase; COG0346 Lactoylglutathione lyase and related lyases. (137 aa)    
Predicted Functional Partners:
AGI23439.1
Antibiotic biosynthesis monooxygenase.
 
  
 0.743
AGI25497.1
Outer membrane porin OprO; COG3746 Phosphate-selective porin.
  
     0.607
AGI23037.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
 
  
 0.522
AGI23701.1
Hypothetical protein.
  
     0.503
AGI23475.1
COG0778 Nitroreductase.
 
    0.486
AGI23038.1
Lipopolysaccharide kinase InaA.
 
 
 
 0.473
nuoC
Bifunctional NADH:ubiquinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
  
 0.467
AGI26353.1
Lipopolysaccharide core biosynthesis protein.
  
     0.464
AGI23939.1
Hypothetical protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
  
     0.438
AGI24749.1
Transcriptional regulator.
  
     0.428
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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