STRINGSTRING
AGI23445.1 AGI23445.1 rimO rimO AGI23447.1 AGI23447.1 AGI23446.1 AGI23446.1 AGI22266.1 AGI22266.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23445.1COG3038 Cytochrome B561. (187 aa)    
Predicted Functional Partners:
rimO
Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
    
 0.705
AGI23447.1
Transmembrane acid tolerance protein; COG0392 Predicted integral membrane protein.
       0.504
AGI23446.1
Hypothetical protein; COG3946 Type IV secretory pathway, VirJ component.
       0.502
AGI22266.1
Hypothetical protein.
 
  
 0.467
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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