Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGI21941.1 | AGI23453.1 | H681_00295 | H681_07885 | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.416 |
| AGI21941.1 | AGI23458.1 | H681_00295 | H681_07910 | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.430 |
| AGI21941.1 | AGI23494.1 | H681_00295 | H681_08090 | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Methyltransferase domain protein; COG0500 SAM-dependent methyltransferases. | 0.433 |
| AGI21941.1 | rlmB | H681_00295 | H681_22105 | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Putative rRNA methylase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | 0.560 |
| AGI21941.1 | rumA | H681_00295 | H681_07905 | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 23S rRNA m(5)U1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.592 |
| AGI21941.1 | trmB | H681_00295 | H681_01730 | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.668 |
| AGI23453.1 | AGI21941.1 | H681_07885 | H681_00295 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.416 |
| AGI23453.1 | AGI23454.1 | H681_07885 | H681_07890 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.910 |
| AGI23453.1 | AGI23455.1 | H681_07885 | H681_07895 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | COG0642 Signal transduction histidine kinase. | 0.757 |
| AGI23453.1 | AGI23458.1 | H681_07885 | H681_07910 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.571 |
| AGI23453.1 | cysM | H681_07885 | H681_07900 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.537 |
| AGI23453.1 | mazG | H681_07885 | H681_07915 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | Nucleoside triphosphate pyrophosphohydrolase; COG1694 Predicted pyrophosphatase. | 0.454 |
| AGI23453.1 | rumA | H681_07885 | H681_07905 | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 23S rRNA m(5)U1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.552 |
| AGI23454.1 | AGI23453.1 | H681_07890 | H681_07885 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.910 |
| AGI23454.1 | AGI23455.1 | H681_07890 | H681_07895 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG0642 Signal transduction histidine kinase. | 0.996 |
| AGI23454.1 | AGI23458.1 | H681_07890 | H681_07910 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.451 |
| AGI23454.1 | cysM | H681_07890 | H681_07900 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.606 |
| AGI23454.1 | mazG | H681_07890 | H681_07915 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Nucleoside triphosphate pyrophosphohydrolase; COG1694 Predicted pyrophosphatase. | 0.443 |
| AGI23454.1 | rumA | H681_07890 | H681_07905 | COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 23S rRNA m(5)U1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.610 |
| AGI23455.1 | AGI23453.1 | H681_07895 | H681_07885 | COG0642 Signal transduction histidine kinase. | Sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase. | 0.757 |
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