STRINGSTRING
AGI23460.1 AGI23460.1 AGI26556.1 AGI26556.1 arnT arnT AGI22905.1 AGI22905.1 AGI24521.1 AGI24521.1 AGI25524.1 AGI25524.1 AGI23830.1 AGI23830.1 AGI26327.1 AGI26327.1 AGI23461.1 AGI23461.1 AGI22674.1 AGI22674.1 AGI22550.1 AGI22550.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AGI23460.1Hypothetical protein; COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases. (310 aa)    
Predicted Functional Partners:
AGI26556.1
Hypothetical protein; COG0671 Membrane-associated phospholipid phosphatase.
  
  
 0.919
arnT
4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.
     
 0.905
AGI22905.1
Lipopolysaccharide biosynthetic protein LpxO1; COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases.
  
  
 
0.905
AGI24521.1
Hypothetical protein; COG2194 Predicted membrane-associated, metal-dependent hydrolase.
     
 0.903
AGI25524.1
Hypothetical protein; COG2194 Predicted membrane-associated, metal-dependent hydrolase.
     
 0.903
AGI23830.1
COG3528 Uncharacterized protein conserved in bacteria.
     
  0.900
AGI26327.1
Lipoprotein.
  
     0.547
AGI23461.1
COG3122 Uncharacterized protein conserved in bacteria.
       0.536
AGI22674.1
Putative glucose-sensitive porin; COG3659 Carbohydrate-selective porin.
  
     0.523
AGI22550.1
Outer membrane usher protein; COG3188 P pilus assembly protein, porin PapC.
  
    0.490
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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