STRINGSTRING
AGI23465.1 AGI23465.1 AGI23463.1 AGI23463.1 AGI23802.1 AGI23802.1 AGI23464.1 AGI23464.1 AGI23462.1 AGI23462.1 AGI26658.1 AGI26658.1 AGI26929.1 AGI26929.1 AGI25139.1 AGI25139.1 AGI25716.1 AGI25716.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23465.1COG1846 Transcriptional regulators. (189 aa)    
Predicted Functional Partners:
AGI23463.1
Hypothetical protein; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
     0.820
AGI23802.1
Hypothetical protein.
  
     0.730
AGI23464.1
Hypothetical protein.
     
 0.600
AGI23462.1
COG4568 Transcriptional antiterminator.
       0.570
AGI26658.1
COG3313 Predicted Fe-S protein.
 
     0.536
AGI26929.1
COG3312 F0F1-type ATP synthase, subunit I.
  
     0.492
AGI25139.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
   
 0.468
AGI25716.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.411
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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