STRINGSTRING
AGI23493.1 AGI23493.1 AGI23492.1 AGI23492.1 AGI22800.1 AGI22800.1 AGI23288.1 AGI23288.1 AGI23172.1 AGI23172.1 AGI24139.1 AGI24139.1 AGI25953.1 AGI25953.1 AGI22594.1 AGI22594.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23493.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
AGI23492.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
       0.503
AGI22800.1
COG1734 DnaK suppressor protein.
   
  
 0.481
AGI23288.1
Integral membrane protein.
  
     0.457
AGI23172.1
Integral membrane protein; COG3399 Uncharacterized protein conserved in bacteria.
  
     0.440
AGI24139.1
Transcriptional regulator XylS; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.418
AGI25953.1
COG0426 Uncharacterized flavoproteins.
  
  
 0.405
AGI22594.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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