STRINGSTRING
AGI23495.1 AGI23495.1 AGI26215.1 AGI26215.1 AGI23494.1 AGI23494.1 AGI23496.1 AGI23496.1 AGI21961.1 AGI21961.1 AGI23621.1 AGI23621.1 AGI26239.1 AGI26239.1 AGI22607.1 AGI22607.1 AGI24996.1 AGI24996.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23495.1Mechanosensitive ion channel family protein; COG3264 Small-conductance mechanosensitive channel. (810 aa)    
Predicted Functional Partners:
AGI26215.1
Membrane protein, MarC family; COG2095 Multiple antibiotic transporter.
 
    0.497
AGI23494.1
Methyltransferase domain protein; COG0500 SAM-dependent methyltransferases.
 
     0.477
AGI23496.1
Acetylpolyamine aminohydrolase; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
       0.463
AGI21961.1
COG5339 Uncharacterized protein conserved in bacteria.
 
     0.456
AGI23621.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
    0.439
AGI26239.1
COG0477 Permeases of the major facilitator superfamily.
  
    0.414
AGI22607.1
COG3416 Uncharacterized protein conserved in bacteria.
  
     0.412
AGI24996.1
Putative outer membrane autotransporter; COG3468 Type V secretory pathway, adhesin AidA.
  
     0.400
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
Server load: low (18%) [HD]