STRINGSTRING
AGI23506.1 AGI23506.1 AGI23505.1 AGI23505.1 AGI23504.1 AGI23504.1 AGI22533.1 AGI22533.1 AGI23507.1 AGI23507.1 AGI23503.1 AGI23503.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGI23506.1DTW domain-containing protein. (199 aa)    
Predicted Functional Partners:
AGI23505.1
Protein GbuR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.773
AGI23504.1
Guanidinobutyrase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
       0.429
AGI22533.1
COG2094 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
  
     0.410
AGI23507.1
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.406
AGI23503.1
Hypothetical protein.
       0.405
Your Current Organism:
Pseudomonas sp. ATCC 13867
NCBI taxonomy Id: 1294143
Other names: P. sp. ATCC 13867, Pseudomonas denitrificans ATCC 13867
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